EnhancerDB
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  3. rs10789409[chr1:42234315]
Enhancers that have rs10789409[chr1:42234315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 42234207 42234564 vista1355
VISTA
Transcript factors that have rs10789409[chr1:42234315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42234283 42234487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802977
chr1 42234304 42234318 GLIS2 JASPAR yes 28419902
chr1 42234304 42234318 GLIS2 JASPAR yes 118280027
chr1 42234315 42234320 TFAP2A TRANSFAC yes 28419903
chr1 42234315 42234320 TFAP2A TRANSFAC yes 118280028
chr1 42234315 42234321 MZF1 JASPAR yes 28419904
chr1 42234315 42234321 MZF1 JASPAR yes 118280029
Genes associated with rs10789409[chr1:42234315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More