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- rs10797816[chr1:182998486]
Enhancers that have rs10797816[chr1:182998486]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
182994265 |
183004736 |
enh27301 |
|
|
Transcript factors that have rs10797816[chr1:182998486]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
182998389
|
182998982
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
107850503
|
|
|
chr1
|
182998437
|
182998938
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21358671
|
|
|
chr1
|
182998437
|
182998938
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107850504
|
|
|
chr1
|
182998456
|
182999256
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
107850505
|
|
|
chr1
|
182998481
|
182999031
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107850506
|
|
Genes associated with rs10797816[chr1:182998486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
182992595
|
183114727
|
+
|
LAMC1
|
ENSG00000135862.5
|
182992595
|
0
|
Esophagus
|
9.47718e-09
|
1637
|
|