EnhancerDB
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  3. rs10828647[chr10:24673610]
Enhancers that have rs10828647[chr10:24673610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 24665565 24684360 enh13059
Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10828647[chr10:24673610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 24673602 24673611 SNAI2 JASPAR yes 126068228
chr10 24673602 24673612 ID4 JASPAR yes 126068229
chr10 24673602 24673612 NHLH1 JASPAR yes 126068230
chr10 24673602 24673612 TCF3 JASPAR yes 126068231
chr10 24673602 24673612 TCF4 JASPAR yes 126068232
chr10 24673607 24673620 SMAD2 JASPAR yes 126068233
Genes associated with rs10828647[chr10:24673610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More