EnhancerDB
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Enhancers that have rs10840550[chr11:2223850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 2210565 2239175 enh13693
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Lung (A549) Stomach Placenta Breast Thyroid Lung (PC-9) Pancreas Spleen Muscle (Myotube) Blood (T-cell) Heart
chr11 2223798 2223980 vista9399
VISTA
Transcript factors that have rs10840550[chr11:2223850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 2223671 2224061 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107952778
chr11 2223706 2224016 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107952779
chr11 2223713 2224037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107952780
chr11 2223736 2223982 MYC UCSC Txn Factor no Conserved 107952781
chr11 2223738 2224122 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21466644
chr11 2223738 2224122 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107952782
chr11 2223766 2223960 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21466645
chr11 2223766 2223960 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107952783
chr11 2223839 2223852 TFAP2A JASPAR yes 36992933
chr11 2223839 2223852 TFAP2B JASPAR yes 36992934
chr11 2223839 2223852 TFAP2C JASPAR yes 36992935
chr11 2223839 2223852 TFAP2A JASPAR yes 114030249
chr11 2223839 2223852 TFAP2B JASPAR yes 114030250
chr11 2223839 2223852 TFAP2C JASPAR yes 114030251
chr11 2223840 2223851 EBF1 JASPAR yes 36992936
chr11 2223840 2223851 EBF1 JASPAR yes 114030252
chr11 2223840 2223852 TFAP2A JASPAR yes 36992937
chr11 2223840 2223852 TFAP2B JASPAR yes 36992938
chr11 2223840 2223852 TFAP2A JASPAR yes 114030253
chr11 2223840 2223852 TFAP2B JASPAR yes 114030254
chr11 2223844 2223853 HIC2 JASPAR yes 36992939
chr11 2223844 2223853 HIC2 JASPAR yes 114030255
chr11 2223847 2223851 LFA1 TRANSFAC yes 36992940
chr11 2223847 2223851 LFA1 TRANSFAC yes 114030256
chr11 2223848 2223860 INSM1 JASPAR yes 36992941
chr11 2223848 2223860 INSM1 JASPAR yes 114030257
Genes associated with rs10840550[chr11:2223850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More