EnhancerDB
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  3. rs10846920[chr12:122943231]
Enhancers that have rs10846920[chr12:122943231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs10846920[chr12:122943231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122942166 122943341 TCF7L2 GTRD no Colon (HCT116) 21579866
chr12 122942437 122943372 ZNF274 GTRD no Liver (HepG2) 21579869
chr12 122942532 122943652 ZNF274 GTRD no Cervix (HeLa-S3) 21579885
chr12 122942623 122943341 ZNF274 GTRD no Liver (HepG2) 21579901
chr12 122942930 122943617 ZNF143 GTRD no Epithelial (MCF-7) 21579909
chr12 122943076 122943250 ZNF143 GTRD no Epithelial (MCF-7) 21579910
chr12 122943213 122943231 IRF2 JASPAR yes 124281771
chr12 122943219 122943238 PAX5 JASPAR yes 124281773
Genes associated with rs10846920[chr12:122943231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More