EnhancerDB
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  3. rs10890172[chr1:42417182]
Enhancers that have rs10890172[chr1:42417182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs10890172[chr1:42417182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42417166 42417182 SOX8 JASPAR yes 28441117
chr1 42417178 42417190 POU2F1 JASPAR yes 28441119
chr1 42417178 42417191 POU3F3 JASPAR yes 28441120
chr1 42417178 42417192 POU1F1 JASPAR yes 28441121
chr1 42417179 42417191 POU3F1 JASPAR yes 28441122
chr1 42417179 42417191 POU3F2 JASPAR yes 28441123
chr1 42417179 42417192 POU2F2 JASPAR yes 28441124
chr1 42417180 42417188 FOXL1 JASPAR yes 28441125
chr1 42417180 42417189 POU3F4 JASPAR yes 28441126
chr1 42417180 42417189 POU5F1B JASPAR yes 28441127
Genes associated with rs10890172[chr1:42417182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More