EnhancerDB
  1. Home
  2. SNP
  3. rs10912460[chr1:172716830]
Enhancers that have rs10912460[chr1:172716830]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs10912460[chr1:172716830]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172716729 172717065 ZNF143 GTRD no Epithelial (MCF-7) 21350240
chr1 172716823 172716835 PROX1 JASPAR yes 33151205
chr1 172716829 172716848 PAX5 JASPAR yes 33151206
Genes associated with rs10912460[chr1:172716830], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More