EnhancerDB
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  3. rs10912482[chr1:172828413]
Enhancers that have rs10912482[chr1:172828413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172826285 172832604 enh27244
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9)
Transcript factors that have rs10912482[chr1:172828413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172828221 172828725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846189
chr1 172828244 172828688 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846190
chr1 172828322 172828662 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846191
chr1 172828326 172828722 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846192
chr1 172828342 172828918 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846193
chr1 172828348 172828692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846194
chr1 172828360 172828690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846195
chr1 172828372 172828687 CEBPB UCSC Txn Factor no Conserved 107846196
chr1 172828372 172828687 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846197
chr1 172828385 172828705 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846198
chr1 172828395 172828656 EP300 UCSC Txn Factor no Conserved 107846199
chr1 172828395 172828656 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846200
chr1 172828410 172828426 SOX4 JASPAR yes 33157795
chr1 172828410 172828426 SOX4 JASPAR yes 118400041
chr1 172828411 172828417 SOX10 JASPAR yes 33157796
chr1 172828412 172828788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846201
Genes associated with rs10912482[chr1:172828413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More