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- rs11078639[chr17:1686563]
Enhancers that have rs11078639[chr17:1686563]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
1680879 |
1690071 |
enh16928 |
|
|
Transcript factors that have rs11078639[chr17:1686563]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
1686556
|
1686571
|
ZIC4
|
JASPAR
|
yes
|
|
52700821
|
|
|
chr17
|
1686556
|
1686572
|
GLIS1
|
JASPAR
|
yes
|
|
52700822
|
|
|
chr17
|
1686557
|
1686571
|
GLIS2
|
JASPAR
|
yes
|
|
52700823
|
|
|
chr17
|
1686557
|
1686571
|
GLIS3
|
JASPAR
|
yes
|
|
52700824
|
|
|
chr17
|
1686557
|
1686571
|
ZIC1
|
JASPAR
|
yes
|
|
52700825
|
|
Genes associated with rs11078639[chr17:1686563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
1682779
|
1733928
|
-
|
SMYD4
|
ENSG00000186532.7
|
1733928
|
0
|
Esophagus
|
1.02609e-17
|
15228
|
|
|
chr17
|
1682779
|
1733928
|
-
|
SMYD4
|
ENSG00000186532.7
|
1733928
|
0
|
Stomach
|
0.000473579
|
15228
|
|