EnhancerDB
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  3. rs111173933[chr12:108999842]
Enhancers that have rs111173933[chr12:108999842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs111173933[chr12:108999842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108999558 108999928 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570957
chr12 108999706 109000126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570958
chr12 108999822 108999842 RREB1 JASPAR yes 123605614
chr12 108999823 108999843 RREB1 JASPAR yes 123605615
chr12 108999828 108999848 RREB1 JASPAR yes 123605616
chr12 108999829 108999849 RREB1 JASPAR yes 123605617
chr12 108999830 108999845 RUNX2 JASPAR yes 123605618
chr12 108999831 108999851 RREB1 JASPAR yes 123605619
chr12 108999834 108999844 RUNX3 JASPAR yes 123605620
chr12 108999834 108999853 PAX5 JASPAR yes 123605621
chr12 108999835 108999844 RUNX2 JASPAR yes 123605622
chr12 108999836 108999856 RREB1 JASPAR yes 123605623
Genes associated with rs111173933[chr12:108999842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More