EnhancerDB
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  3. rs111352396[chr1:43427798]
Enhancers that have rs111352396[chr1:43427798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs111352396[chr1:43427798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43427781 43427798 RXRA JASPAR yes 28470977
chr1 43427787 43427798 CDX2 JASPAR yes 28470987
chr1 43427788 43427801 NR2F1 JASPAR yes 28470988
chr1 43427789 43427808 CTCF JASPAR yes 28470989
chr1 43427794 43427807 TFAP2A JASPAR yes 28470990
chr1 43427794 43427807 TFAP2B JASPAR yes 28470991
chr1 43427794 43427807 TFAP2C JASPAR yes 28470992
chr1 43427795 43427806 EBF1 JASPAR yes 28470993
Genes associated with rs111352396[chr1:43427798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More