EnhancerDB
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  3. rs11170025[chr12:52556852]
Enhancers that have rs11170025[chr12:52556852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs11170025[chr12:52556852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52556844 52556859 ZIC4 JASPAR yes 120923996
chr12 52556845 52556856 EBF1 JASPAR yes 120923997
chr12 52556845 52556858 TFAP2A JASPAR yes 120923998
chr12 52556845 52556858 TFAP2B JASPAR yes 120923999
chr12 52556845 52556858 TFAP2C JASPAR yes 120924000
chr12 52556845 52556859 PLAG1 JASPAR yes 120924001
chr12 52556846 52556858 TFAP2A JASPAR yes 120924002
chr12 52556846 52556861 TFAP2C JASPAR yes 120924003
chr12 52556847 52556858 EBF1 JASPAR yes 120924004
chr12 52556847 52556861 PLAG1 JASPAR yes 120924005
chr12 52556848 52556857 TFAP2A JASPAR yes 120924006
chr12 52556852 52556857 SP1 TRANSFAC yes 120924007
Genes associated with rs11170025[chr12:52556852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More