EnhancerDB
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  3. rs111996004[chr12:49678490]
Enhancers that have rs111996004[chr12:49678490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49668765 49679836 enh14698
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Muscle (A673) Placenta Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr12 49678404 49678529 vista13337
VISTA
Transcript factors that have rs111996004[chr12:49678490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49678476 49678495 PAX5 JASPAR yes 82400307
chr12 49678476 49678495 PAX5 JASPAR yes 120771660
Genes associated with rs111996004[chr12:49678490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 49962001 50038449 + PRPF40B ENSG00000110844.9 49962001 283511 Esophagus 0.30809 12033
chr12 49687035 49692465 + PRPH ENSG00000135406.9 49687035 8545 Breast 0.00327983 12026
chr12 50184929 50222533 - NCKAP5L ENSG00000167566.12 50222533 506439 Ovary 0.393605 12037