EnhancerDB
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  3. rs112051666[chr1:42203353]
Enhancers that have rs112051666[chr1:42203353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs112051666[chr1:42203353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42203349 42203359 ALX3 JASPAR yes 28415573
chr1 42203349 42203359 ESX1 JASPAR yes 28415574
chr1 42203349 42203359 GSX2 JASPAR yes 28415575
chr1 42203349 42203359 HESX1 JASPAR yes 28415576
chr1 42203349 42203359 LHX6 JASPAR yes 28415577
chr1 42203349 42203359 MIXL1 JASPAR yes 28415578
chr1 42203349 42203359 MNX1 JASPAR yes 28415579
chr1 42203349 42203359 NOTO JASPAR yes 28415580
chr1 42203349 42203359 RAX JASPAR yes 28415581
chr1 42203350 42203358 ISX JASPAR yes 28415582
chr1 42203350 42203358 LMX1A JASPAR yes 28415583
chr1 42203350 42203358 LMX1B JASPAR yes 28415584
chr1 42203350 42203358 NKX6-1 JASPAR yes 28415585
chr1 42203350 42203358 NKX6-2 JASPAR yes 28415586
chr1 42203350 42203358 PRRX1 JASPAR yes 28415587
chr1 42203350 42203358 RAX2 JASPAR yes 28415588
chr1 42203350 42203358 SHOX JASPAR yes 28415589
chr1 42203350 42203358 UNCX JASPAR yes 28415590
chr1 42203350 42203358 VAX1 JASPAR yes 28415591
chr1 42203351 42203362 PHOX2A JASPAR yes 28415592
Genes associated with rs112051666[chr1:42203353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More