EnhancerDB
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Enhancers that have rs112133345[chr1:201467649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs112133345[chr1:201467649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201466435 201470115 ZNF143 GTRD no Epithelial (MCF-7) 21364364
chr1 201466435 201470115 ZNF143 GTRD no Epithelial (MCF-7) 107856383
chr1 201466810 201470403 ZNF143 GTRD no Epithelial (MCF-7) 21364365
chr1 201466810 201470403 ZNF143 GTRD no Epithelial (MCF-7) 107856384
chr1 201467268 201469929 ZNF274 GTRD no Cervix (HeLa-S3) 107856385
chr1 201467387 201469715 ZNF274 GTRD no Cervix (HeLa-S3) 107856386
chr1 201467394 201469858 ZNF274 GTRD no Blood (GM12878) 107856387
chr1 201467414 201470119 ZNF143 GTRD no Epithelial (MCF-7) 21364366
chr1 201467414 201470119 ZNF143 GTRD no Epithelial (MCF-7) 107856388
chr1 201467420 201470199 ZNF143 GTRD no Epithelial (MCF-7) 21364367
chr1 201467420 201470199 ZNF143 GTRD no Epithelial (MCF-7) 107856389
chr1 201467436 201470243 ZNF143 GTRD no Epithelial (MCF-7) 21364368
chr1 201467436 201470243 ZNF143 GTRD no Epithelial (MCF-7) 107856390
chr1 201467442 201470108 ZNF143 GTRD no Epithelial (MCF-7) 21364369
chr1 201467442 201470108 ZNF143 GTRD no Epithelial (MCF-7) 107856391
chr1 201467442 201470351 ZNF143 GTRD no Epithelial (MCF-7) 21364370
chr1 201467442 201470351 ZNF143 GTRD no Epithelial (MCF-7) 107856392
chr1 201467469 201469924 ZBTB33 GTRD no Lung (A549) 107856393
chr1 201467473 201470060 ZBTB33 GTRD no Lung (A549) 107856394
chr1 201467479 201470303 ZNF274 GTRD no Cervix (HeLa-S3) 107856395
chr1 201467482 201470109 ZNF143 GTRD no Epithelial (MCF-7) 21364371
chr1 201467482 201470109 ZNF143 GTRD no Epithelial (MCF-7) 107856396
chr1 201467489 201469853 ZNF274 GTRD no Liver (HepG2) 21364372
chr1 201467489 201469853 ZNF274 GTRD no Liver (HepG2) 107856397
chr1 201467492 201470152 ZNF143 GTRD no Epithelial (MCF-7) 21364373
chr1 201467492 201470152 ZNF143 GTRD no Epithelial (MCF-7) 107856398
chr1 201467513 201469800 ZNF274 GTRD no Cervix (HeLa-S3) 107856399
chr1 201467516 201470091 ZBTB33 GTRD no Lung (A549) 107856400
chr1 201467527 201470146 ZNF143 GTRD no Epithelial (MCF-7) 21364374
chr1 201467527 201470146 ZNF143 GTRD no Epithelial (MCF-7) 107856401
chr1 201467534 201470208 ZNF143 GTRD no Epithelial (MCF-7) 21364375
chr1 201467534 201470208 ZNF143 GTRD no Epithelial (MCF-7) 107856402
chr1 201467547 201470023 TCF7L2 GTRD no Colon (HCT116) 107856403
chr1 201467554 201469884 ZNF274 GTRD no Liver (HepG2) 21364376
chr1 201467554 201469884 ZNF274 GTRD no Liver (HepG2) 107856404
chr1 201467562 201469815 ZNF143 GTRD no Epithelial (MCF-7) 21364377
chr1 201467562 201469815 ZNF143 GTRD no Epithelial (MCF-7) 107856405
chr1 201467575 201469925 ZBTB33 GTRD no Lung (A549) 107856406
chr1 201467584 201470018 ZBTB33 GTRD no Lung (A549) 107856407
chr1 201467591 201469823 ZBTB33 GTRD no Lung (A549) 107856408
chr1 201467601 201470090 TCF7L2 GTRD no Colon (HCT116) 107856409
chr1 201467607 201470346 ZNF143 GTRD no Epithelial (MCF-7) 21364378
chr1 201467607 201470346 ZNF143 GTRD no Epithelial (MCF-7) 107856410
chr1 201467613 201470030 ZBTB33 GTRD no Lung (A549) 107856411
chr1 201467616 201470065 ZNF143 GTRD no Epithelial (MCF-7) 21364379
chr1 201467616 201470065 ZNF143 GTRD no Epithelial (MCF-7) 107856412
chr1 201467632 201469782 ZNF143 GTRD no Epithelial (MCF-7) 21364380
chr1 201467632 201469782 ZNF143 GTRD no Epithelial (MCF-7) 107856413
chr1 201467645 201467664 RFX2 JASPAR yes 34498597
chr1 201467647 201467662 RFX5 JASPAR yes 34498598
Genes associated with rs112133345[chr1:201467649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 202116141 202130716 - PTPN7 ENSG00000143851.11 202130716 648492 Esophagus 0.250011 1719