EnhancerDB
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  3. rs112540570[chr2:39661824]
Enhancers that have rs112540570[chr2:39661824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39650200 39662440 enh18468
Prostate (PC-3) Brain (SK-N-MC) Esophagus Placenta Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs112540570[chr2:39661824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39661813 39661831 NFYA JASPAR yes 73201230
chr2 39661816 39661832 NFYA JASPAR yes 73201231
chr2 39661818 39661828 EN2 JASPAR yes 73201232
chr2 39661818 39661828 ESX1 JASPAR yes 73201233
chr2 39661818 39661828 GBX1 JASPAR yes 73201234
chr2 39661818 39661828 GBX2 JASPAR yes 73201235
chr2 39661818 39661828 HESX1 JASPAR yes 73201236
chr2 39661818 39661828 HOXB3 JASPAR yes 73201237
chr2 39661818 39661828 LBX2 JASPAR yes 73201238
chr2 39661818 39661828 LHX2 JASPAR yes 73201239
chr2 39661818 39661828 RAX JASPAR yes 73201240
chr2 39661819 39661827 BARX1 JASPAR yes 73201241
chr2 39661819 39661827 BSX JASPAR yes 73201242
chr2 39661819 39661827 EN1 JASPAR yes 73201243
chr2 39661819 39661827 ISX JASPAR yes 73201244
chr2 39661819 39661827 LHX9 JASPAR yes 73201245
chr2 39661819 39661827 MSX1 JASPAR yes 73201246
chr2 39661819 39661827 MSX2 JASPAR yes 73201247
chr2 39661819 39661827 PRRX1 JASPAR yes 73201248
chr2 39661819 39661827 RAX2 JASPAR yes 73201249
chr2 39661819 39661827 SHOX JASPAR yes 73201250
chr2 39661819 39661828 VENTX JASPAR yes 73201251
chr2 39661819 39661834 NFYB JASPAR yes 73201252
chr2 39661820 39661831 PHOX2A JASPAR yes 73201253
Genes associated with rs112540570[chr2:39661824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More