EnhancerDB
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  3. rs112941414[chr1:54873125]
Enhancers that have rs112941414[chr1:54873125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
chr1 54873075 54873515 vista1656
VISTA
Transcript factors that have rs112941414[chr1:54873125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54871362 54873212 ZNF274 GTRD no Liver (HepG2) 107804945
chr1 54872891 54873467 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804946
chr1 54872918 54873258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804947
chr1 54872936 54873236 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804948
chr1 54872960 54873556 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107804949
chr1 54872986 54873670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804950
chr1 54872995 54873255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804951
chr1 54873022 54873512 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804952
chr1 54873058 54873514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804953
chr1 54873060 54873720 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804954
chr1 54873063 54873410 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804955
chr1 54873073 54873529 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804956
chr1 54873077 54873573 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804957
chr1 54873080 54873690 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804958
chr1 54873085 54873575 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804959
chr1 54873087 54873591 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804960
chr1 54873094 54873275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804961
chr1 54873120 54873130 SP1 JASPAR yes 28982940
chr1 54873120 54873130 ZNF740 JASPAR yes 28982941
chr1 54873120 54873130 SP1 JASPAR yes 118292715
chr1 54873120 54873130 ZNF740 JASPAR yes 118292716
chr1 54873121 54873131 ZNF740 JASPAR yes 28982942
chr1 54873121 54873131 ZNF740 JASPAR yes 118292717
Genes associated with rs112941414[chr1:54873125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More