EnhancerDB
  1. Home
  2. SNP
  3. rs112990028[chr5:172192325]
Enhancers that have rs112990028[chr5:172192325]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
chr5 172192263 172193766 vista50162
VISTA
Transcript factors that have rs112990028[chr5:172192325]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172192304 172192884 ATF2 UCSC Txn Factor no Conserved 108537473
chr5 172192315 172192332 ESR1 JASPAR yes 67824140
chr5 172192315 172192332 ESR1 JASPAR yes 70762402
chr5 172192325 172192335 RORA JASPAR yes 67824141
chr5 172192325 172192335 RORA JASPAR yes 70762403
Genes associated with rs112990028[chr5:172192325], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More