EnhancerDB
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  3. rs113646884[chr17:28729448]
Enhancers that have rs113646884[chr17:28729448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28728611 28734526 enh69255
Colon (HCT116) Neural Stem Cells (H9) Liver (HepG2) Lung (PC-9)
Transcript factors that have rs113646884[chr17:28729448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28713934 28729821 ZBTB33 GTRD no Lung (A549) 21749787
chr17 28713934 28729821 ZBTB33 GTRD no Lung (A549) 108248598
chr17 28715308 28729700 ZBTB33 GTRD no Lung (A549) 21749788
chr17 28715308 28729700 ZBTB33 GTRD no Lung (A549) 108248599
chr17 28716010 28729637 ZBTB33 GTRD no Lung (A549) 21749791
chr17 28716010 28729637 ZBTB33 GTRD no Lung (A549) 108248602
chr17 28716080 28729615 ZBTB33 GTRD no Lung (A549) 21749792
chr17 28716080 28729615 ZBTB33 GTRD no Lung (A549) 108248603
chr17 28716367 28729656 ZBTB33 GTRD no Lung (A549) 21749795
chr17 28716367 28729656 ZBTB33 GTRD no Lung (A549) 108248607
chr17 28729440 28729460 TP63 JASPAR yes 53797292
chr17 28729441 28729459 TP53 JASPAR yes 53797293
chr17 28729441 28729459 TP63 JASPAR yes 53797294
chr17 28729441 28729459 TP73 JASPAR yes 53797295
chr17 28729448 28729460 HES5 JASPAR yes 53797296
chr17 28729448 28729460 HES7 JASPAR yes 53797297
chr17 28729448 28729460 PKNOX2 JASPAR yes 53797298
chr17 28729448 28729464 T JASPAR yes 53797299
Genes associated with rs113646884[chr17:28729448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 29233362 29286340 + ADAP2 ENSG00000184060.6 29233362 503914 Esophagus 0.230027 15617
chr17 27900487 27921072 - GIT1 ENSG00000108262.11 27921072 808376 Ovary 0.8251 15602