EnhancerDB
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  3. rs113681974[chr1:172716049]
Enhancers that have rs113681974[chr1:172716049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs113681974[chr1:172716049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172715486 172716423 P63 GTRD no Skin (Keratinocyte) 107846008
chr1 172715508 172716453 P63 GTRD no Skin (Keratinocyte) 107846017
chr1 172715541 172716456 P63 GTRD no Skin (Keratinocyte) 107846035
chr1 172715658 172716400 P63 GTRD no Skin (Keratinocyte) 107846046
chr1 172715660 172716130 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21350239
chr1 172715660 172716130 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107846047
chr1 172716042 172716054 POU2F1 JASPAR yes 33151039
chr1 172716042 172716055 POU3F3 JASPAR yes 33151040
chr1 172716043 172716055 POU3F1 JASPAR yes 33151041
chr1 172716043 172716055 POU3F2 JASPAR yes 33151042
chr1 172716044 172716053 POU3F4 JASPAR yes 33151043
chr1 172716044 172716053 POU5F1B JASPAR yes 33151044
Genes associated with rs113681974[chr1:172716049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More