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- rs113899234[chr16:1977807]
Enhancers that have rs113899234[chr16:1977807]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1977210 |
1987595 |
enh16500 |
|
|
Transcript factors that have rs113899234[chr16:1977807]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1976513
|
1983045
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171868
|
|
|
chr16
|
1976970
|
1981660
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171869
|
|
|
chr16
|
1977680
|
1980548
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171870
|
|
|
chr16
|
1977767
|
1980762
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171871
|
|
|
chr16
|
1977787
|
1977808
|
IRF1
|
JASPAR
|
yes
|
|
9166056
|
|
|
chr16
|
1977789
|
1977810
|
IRF1
|
JASPAR
|
yes
|
|
9166058
|
|
|
chr16
|
1977803
|
1977812
|
HIC2
|
JASPAR
|
yes
|
|
9166060
|
|
|
chr16
|
1977804
|
1977820
|
ZNF143
|
JASPAR
|
yes
|
|
9166061
|
|
|
chr16
|
1977805
|
1977815
|
SP1
|
JASPAR
|
yes
|
|
9166062
|
|
|
chr16
|
1977806
|
1977810
|
LFA1
|
TRANSFAC
|
yes
|
|
9166063
|
|
Genes associated with rs113899234[chr16:1977807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
2190804
|
2204166
|
+
|
RAB26
|
ENSG00000167964.8
|
2190804
|
212997
|
Esophagus
|
0.189429
|
14425
|
|