EnhancerDB
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  3. rs114025878[chr1:42423179]
Enhancers that have rs114025878[chr1:42423179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs114025878[chr1:42423179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42423168 42423183 NFYB JASPAR yes 28442037
chr1 42423170 42423183 DUXA JASPAR yes 28442038
chr1 42423170 42423186 NFYA JASPAR yes 28442039
chr1 42423171 42423182 DUX4 JASPAR yes 28442040
chr1 42423171 42423189 NFYA JASPAR yes 28442041
chr1 42423175 42423179 H1TF2 TRANSFAC yes 28442042
chr1 42423175 42423179 NFE TRANSFAC yes 28442043
chr1 42423175 42423179 SRF TRANSFAC yes 28442044
Genes associated with rs114025878[chr1:42423179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More