EnhancerDB
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  3. rs114419797[chr5:172189058]
Enhancers that have rs114419797[chr5:172189058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs114419797[chr5:172189058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172189049 172189064 FOXA1 JASPAR yes 67823721
chr5 172189050 172189062 FOXI1 JASPAR yes 67823722
chr5 172189050 172189065 FOXP1 JASPAR yes 67823723
chr5 172189051 172189063 FOXC2 JASPAR yes 67823724
chr5 172189051 172189065 ONECUT2 JASPAR yes 67823725
chr5 172189051 172189065 ONECUT3 JASPAR yes 67823726
chr5 172189052 172189063 FOXB1 JASPAR yes 67823727
chr5 172189052 172189063 FOXC1 JASPAR yes 67823728
chr5 172189057 172189061 YY1 TRANSFAC yes 67823730
chr5 172189058 172189079 IRF1 JASPAR yes 67823731
Genes associated with rs114419797[chr5:172189058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More