EnhancerDB
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  3. rs114741601[chr5:172729560]
Enhancers that have rs114741601[chr5:172729560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
chr5 172729503 172729731 vista50208
VISTA
Transcript factors that have rs114741601[chr5:172729560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172729332 172730116 TCF7L2 UCSC Txn Factor no Conserved 108537554
chr5 172729460 172730075 TFAP2C UCSC Txn Factor no Conserved 108537555
chr5 172729490 172730094 TFAP2A UCSC Txn Factor no Conserved 108537556
chr5 172729507 172729744 NFYB UCSC Txn Factor no Conserved 108537557
chr5 172729551 172729572 IRF1 JASPAR yes 67865928
chr5 172729551 172729572 IRF1 JASPAR yes 70765445
chr5 172729552 172729560 FEV JASPAR yes 67865930
chr5 172729552 172729560 FEV JASPAR yes 70765447
chr5 172729553 172729568 IRF9 JASPAR yes 67865931
chr5 172729553 172729568 IRF9 JASPAR yes 70765448
Genes associated with rs114741601[chr5:172729560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More