EnhancerDB
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  3. rs114978553[chr1:200262425]
Enhancers that have rs114978553[chr1:200262425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs114978553[chr1:200262425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200261989 200262991 ZNF274 GTRD no Blood (GM12878) 21362816
chr1 200262045 200263018 ZNF143 GTRD no Epithelial (MCF-7) 21362817
chr1 200262055 200264105 ZNF274 GTRD no Liver (HepG2) 21362818
chr1 200262065 200262789 ZNF143 GTRD no Epithelial (MCF-7) 21362819
chr1 200262082 200263110 ZNF274 GTRD no Blood (GM12878) 21362820
chr1 200262137 200262926 ZNF274 GTRD no Blood (GM12878) 21362821
chr1 200262144 200262557 ZNF274 GTRD no Liver (HepG2) 21362822
chr1 200262151 200262914 ZNF274 GTRD no Blood (GM12878) 21362823
chr1 200262185 200262825 ZNF143 GTRD no Epithelial (MCF-7) 21362824
chr1 200262202 200262597 ZNF274 GTRD no Blood (GM12878) 21362825
chr1 200262208 200262892 ZNF274 GTRD no Blood (GM12878) 21362826
chr1 200262227 200262690 ZNF274 GTRD no Liver (HepG2) 21362827
chr1 200262238 200263159 ZNF274 GTRD no Blood (GM12878) 21362828
chr1 200262250 200263159 ZNF274 GTRD no Blood (GM12878) 21362829
chr1 200262280 200263174 ZNF274 GTRD no Blood (GM12878) 21362830
chr1 200262285 200262760 ZNF274 GTRD no Blood (GM12878) 21362831
chr1 200262339 200262907 ZNF274 GTRD no Blood (GM12878) 21362832
chr1 200262367 200263244 ZNF274 GTRD no Blood (GM12878) 21362833
chr1 200262374 200263227 ZNF274 GTRD no Blood (GM12878) 21362834
chr1 200262375 200263245 ZNF274 GTRD no Blood (GM12878) 21362835
chr1 200262412 200262426 POU1F1 JASPAR yes 34430376
chr1 200262419 200263812 ZNF274 GTRD no Liver (HepG2) 21362836
Genes associated with rs114978553[chr1:200262425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More