EnhancerDB
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  3. rs115088440[chr12:122941604]
Enhancers that have rs115088440[chr12:122941604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs115088440[chr12:122941604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122940652 122942484 ZNF274 GTRD no Cervix (HeLa-S3) 21579853
chr12 122941103 122941875 ZNF274 GTRD no Cervix (HeLa-S3) 21579857
chr12 122941275 122941831 ZNF274 GTRD no Cervix (HeLa-S3) 21579858
chr12 122941338 122941675 ZNF274 GTRD no Cervix (HeLa-S3) 21579859
chr12 122941356 122941818 ZNF143 GTRD no Epithelial (MCF-7) 21579860
chr12 122941383 122941694 ZNF274 GTRD no Cervix (HeLa-S3) 21579861
chr12 122941390 122941959 TCF7L2 GTRD no Colon (HCT116) 21579862
chr12 122941431 122941850 ZNF274 GTRD no Cervix (HeLa-S3) 21579863
chr12 122941602 122941620 ESR1 JASPAR yes 124281422
chr12 122941603 122941618 ESR2 JASPAR yes 124281423
chr12 122941603 122941623 ESR1 JASPAR yes 124281424
Genes associated with rs115088440[chr12:122941604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More