EnhancerDB
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  3. rs115199441[chr17:62681759]
Enhancers that have rs115199441[chr17:62681759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs115199441[chr17:62681759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679402 62682688 ZNF143 GTRD no Epithelial (MCF-7) 21778920
chr17 62681214 62682443 AR GTRD no Prostate (PC-3) 21778943
chr17 62681354 62682610 ZNF143 GTRD no Epithelial (MCF-7) 21778944
chr17 62681395 62682767 TCF7L2 GTRD no Colon (HCT116) 21778945
chr17 62681516 62682479 TCF7L2 GTRD no Colon (HCT116) 21778946
chr17 62681627 62682495 TCF7L2 GTRD no Colon (HCT116) 21778947
chr17 62681685 62682753 TCF7L2 GTRD no Colon (HCT116) 21778948
chr17 62681743 62681761 NR3C1 JASPAR yes 55311466
chr17 62681752 62681762 NFATC3 JASPAR yes 55311467
chr17 62681754 62681760 ETS1 JASPAR yes 55311468
chr17 62681759 62681770 FOXP2 JASPAR yes 55311469
Genes associated with rs115199441[chr17:62681759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More