EnhancerDB
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  3. rs115220407[chr17:62673639]
Enhancers that have rs115220407[chr17:62673639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs115220407[chr17:62673639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 21778864
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 108282545
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 21778870
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 108282546
chr17 62673623 62673643 RREB1 JASPAR yes 55309973
chr17 62673628 62673640 NHLH1 JASPAR yes 55309974
chr17 62673629 62673639 NHLH1 JASPAR yes 55309975
Genes associated with rs115220407[chr17:62673639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More