EnhancerDB
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  3. rs115224089[chr1:220542752]
Enhancers that have rs115224089[chr1:220542752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs115224089[chr1:220542752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220542736 220542752 SOX4 JASPAR yes 35489201
chr1 220542745 220542754 SRY JASPAR yes 35489202
chr1 220542746 220542759 POU2F2 JASPAR yes 35489203
chr1 220542751 220542771 TP63 JASPAR yes 35489204
Genes associated with rs115224089[chr1:220542752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More