EnhancerDB
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  3. rs115436677[chr1:42136491]
Enhancers that have rs115436677[chr1:42136491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42136267 42136586 vista1341
VISTA
Transcript factors that have rs115436677[chr1:42136491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42136478 42136493 HNF4G JASPAR yes 28408016
chr1 42136478 42136493 HNF4G JASPAR yes 118279318
chr1 42136479 42136493 NR2F1 JASPAR yes 28408017
chr1 42136479 42136493 NR2F1 JASPAR yes 118279319
chr1 42136479 42136494 HNF4A JASPAR yes 28408018
chr1 42136479 42136494 HNF4A JASPAR yes 118279320
Genes associated with rs115436677[chr1:42136491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More