EnhancerDB
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  3. rs115447821[chr17:2717854]
Enhancers that have rs115447821[chr17:2717854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2712160 2721479 enh32057
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 2717801 2718168 vista23732
VISTA
Transcript factors that have rs115447821[chr17:2717854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 21739705
chr17 2717692 2717951 SOX2 GTRD no Neural Stem Cells (H9) 108231232
chr17 2717694 2717964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108231233
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 21739706
chr17 2717731 2718068 SOX2 GTRD no Neural Stem Cells (H9) 108231234
chr17 2717784 2718077 SOX2 GTRD no Neural Stem Cells (H9) 21739707
chr17 2717784 2718077 SOX2 GTRD no Neural Stem Cells (H9) 108231235
chr17 2717853 2717867 PLAG1 JASPAR yes 21185466
chr17 2717853 2717867 PLAG1 JASPAR yes 52774402
chr17 2717854 2717859 TFAP2A TRANSFAC yes 21185467
chr17 2717854 2717859 TFAP2A TRANSFAC yes 52774403
chr17 2717854 2717860 MZF1 JASPAR yes 21185468
chr17 2717854 2717860 MZF1 JASPAR yes 52774404
Genes associated with rs115447821[chr17:2717854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More