EnhancerDB
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  3. rs115563316[chr5:78090377]
Enhancers that have rs115563316[chr5:78090377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78085970 78109615 enh22384
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs115563316[chr5:78090377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78090359 78090380 IRF1 JASPAR yes 63624114
chr5 78090360 78090381 IRF1 JASPAR yes 63624115
chr5 78090365 78090380 FOXP1 JASPAR yes 63624116
chr5 78090366 78090377 FOXA1 JASPAR yes 63624117
chr5 78090366 78090387 IRF1 JASPAR yes 63624118
chr5 78090368 78090379 FOXP2 JASPAR yes 63624119
chr5 78090368 78090383 IRF9 JASPAR yes 63624120
chr5 78090370 78090385 STAT2 JASPAR yes 63624121
chr5 78090372 78090387 FOXP1 JASPAR yes 63624122
chr5 78090375 78090386 FOXP2 JASPAR yes 63624123
chr5 78090377 78090386 SRY JASPAR yes 63624124
Genes associated with rs115563316[chr5:78090377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More