EnhancerDB
  1. Home
  2. SNP
  3. rs115694669[chr1:42249881]
Enhancers that have rs115694669[chr1:42249881]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115694669[chr1:42249881]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42249870 42249885 SCRT1 JASPAR yes 28422205
chr1 42249871 42249881 NKX2-3 JASPAR yes 28422206
chr1 42249872 42249885 SCRT2 JASPAR yes 28422207
chr1 42249875 42249890 RFX5 JASPAR yes 28422208
Genes associated with rs115694669[chr1:42249881], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More