EnhancerDB
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  3. rs115717312[chr1:117041610]
Enhancers that have rs115717312[chr1:117041610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115717312[chr1:117041610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117041492 117042042 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333125
chr1 117041575 117042015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333126
chr1 117041579 117042035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333127
chr1 117041582 117041946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333128
chr1 117041595 117041999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333129
chr1 117041599 117041617 ESR2 JASPAR yes 31814218
chr1 117041602 117041978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333130
Genes associated with rs115717312[chr1:117041610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More