EnhancerDB
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  3. rs11579340[chr1:172939896]
Enhancers that have rs11579340[chr1:172939896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs11579340[chr1:172939896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172939885 172939899 ONECUT1 JASPAR yes 33173357
chr1 172939885 172939899 ONECUT2 JASPAR yes 33173358
chr1 172939885 172939899 ONECUT3 JASPAR yes 33173359
chr1 172939894 172939901 NKX3-1 JASPAR yes 33173360
Genes associated with rs11579340[chr1:172939896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More