EnhancerDB
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  3. rs11580394[chr1:207411912]
Enhancers that have rs11580394[chr1:207411912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207411289 207420112 enh12601
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Lung (A549) Placenta Lung (PC-9) Breast Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs11580394[chr1:207411912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207411163 207416263 ZNF274 GTRD no Blood (GM12878) 107864365
chr1 207411163 207416263 ZNF274 GTRD no Blood (GM12878) 107864366
chr1 207411387 207413681 ZNF274 GTRD no Blood (GM12878) 107864367
chr1 207411390 207415710 ZNF274 GTRD no Blood (GM12878) 107864368
chr1 207411390 207415710 ZNF274 GTRD no Blood (GM12878) 107864369
chr1 207411414 207413685 ZNF274 GTRD no Blood (GM12878) 107864370
chr1 207411446 207415829 ZNF274 GTRD no Blood (GM12878) 107864371
chr1 207411446 207415829 ZNF274 GTRD no Blood (GM12878) 107864372
chr1 207411471 207415958 ZNF274 GTRD no Blood (GM12878) 107864373
chr1 207411471 207415958 ZNF274 GTRD no Blood (GM12878) 107864374
chr1 207411528 207413415 ZNF274 GTRD no Blood (GM12878) 107864375
chr1 207411548 207413629 ZNF274 GTRD no Blood (GM12878) 107864376
chr1 207411550 207413510 ZNF274 GTRD no Blood (GM12878) 107864377
chr1 207411557 207413530 ZNF274 GTRD no Blood (GM12878) 107864378
chr1 207411601 207413641 ZNF274 GTRD no Blood (GM12878) 107864379
chr1 207411609 207413698 ZNF274 GTRD no Blood (GM12878) 107864380
chr1 207411620 207413554 ZNF274 GTRD no Blood (GM12878) 107864381
chr1 207411648 207415397 ZNF274 GTRD no Blood (GM12878) 107864382
chr1 207411648 207415397 ZNF274 GTRD no Blood (GM12878) 107864383
chr1 207411912 207411918 SOX10 JASPAR yes 34849541
Genes associated with rs11580394[chr1:207411912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 207494853 207534311 + CD55 ENSG00000196352.9 207494853 82941 Lung 0.0106184 1798