EnhancerDB
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  3. rs11580828[chr1:25343446]
Enhancers that have rs11580828[chr1:25343446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs11580828[chr1:25343446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25343439 25343458 CTCF JASPAR yes 27553919
chr1 25343442 25343457 HSF1 JASPAR yes 27553920
chr1 25343443 25343456 HSF1 JASPAR yes 27553921
chr1 25343443 25343456 HSF4 JASPAR yes 27553922
chr1 25343444 25343456 TAL1 JASPAR yes 27553923
Genes associated with rs11580828[chr1:25343446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More