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- rs115874799[chr1:178041862]
Enhancers that have rs115874799[chr1:178041862]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
178041559 |
178041872 |
vista4025 |
|
|
Transcript factors that have rs115874799[chr1:178041862]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
178041594
|
178041917
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
107847282
|
|
|
chr1
|
178041854
|
178041865
|
PHOX2A
|
JASPAR
|
yes
|
|
118404947
|
|
|
chr1
|
178041854
|
178041865
|
PROP1
|
JASPAR
|
yes
|
|
118404948
|
|
|
chr1
|
178041857
|
178041867
|
GBX2
|
JASPAR
|
yes
|
|
118404949
|
|
|
chr1
|
178041857
|
178041867
|
HOXB3
|
JASPAR
|
yes
|
|
118404950
|
|
|
chr1
|
178041857
|
178041867
|
MNX1
|
JASPAR
|
yes
|
|
118404951
|
|
|
chr1
|
178041858
|
178041866
|
BARX1
|
JASPAR
|
yes
|
|
118404952
|
|
|
chr1
|
178041858
|
178041866
|
BSX
|
JASPAR
|
yes
|
|
118404953
|
|
|
chr1
|
178041858
|
178041866
|
ISL2
|
JASPAR
|
yes
|
|
118404954
|
|
|
chr1
|
178041858
|
178041866
|
LMX1B
|
JASPAR
|
yes
|
|
118404955
|
|
|
chr1
|
178041858
|
178041866
|
MSX1
|
JASPAR
|
yes
|
|
118404956
|
|
|
chr1
|
178041858
|
178041866
|
MSX2
|
JASPAR
|
yes
|
|
118404957
|
|
|
chr1
|
178041858
|
178041867
|
VENTX
|
JASPAR
|
yes
|
|
118404958
|
|
Genes associated with rs115874799[chr1:178041862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |