EnhancerDB
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  3. rs115876517[chr1:54127120]
Enhancers that have rs115876517[chr1:54127120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54127029 54127330 vista1621
VISTA
Transcript factors that have rs115876517[chr1:54127120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54127112 54127122 EN2 JASPAR yes 118291270
chr1 54127112 54127122 ESX1 JASPAR yes 118291271
chr1 54127112 54127122 GBX1 JASPAR yes 118291272
chr1 54127112 54127122 GBX2 JASPAR yes 118291273
chr1 54127112 54127122 HESX1 JASPAR yes 118291274
chr1 54127112 54127122 HOXB3 JASPAR yes 118291275
chr1 54127112 54127122 LBX2 JASPAR yes 118291276
chr1 54127112 54127122 LHX2 JASPAR yes 118291277
chr1 54127112 54127122 RAX JASPAR yes 118291278
chr1 54127113 54127121 BARX1 JASPAR yes 118291279
chr1 54127113 54127121 BSX JASPAR yes 118291280
chr1 54127113 54127121 EN1 JASPAR yes 118291281
chr1 54127113 54127121 ISX JASPAR yes 118291282
chr1 54127113 54127121 LHX9 JASPAR yes 118291283
chr1 54127113 54127121 MSX1 JASPAR yes 118291284
chr1 54127113 54127121 MSX2 JASPAR yes 118291285
chr1 54127113 54127121 PRRX1 JASPAR yes 118291286
chr1 54127113 54127121 RAX2 JASPAR yes 118291287
chr1 54127113 54127121 SHOX JASPAR yes 118291288
chr1 54127113 54127122 VENTX JASPAR yes 118291289
chr1 54127113 54127127 ONECUT3 JASPAR yes 118291290
chr1 54127114 54127124 PAX3 JASPAR yes 118291291
chr1 54127114 54127125 PHOX2A JASPAR yes 118291292
Genes associated with rs115876517[chr1:54127120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More