EnhancerDB
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  3. rs115901820[chr1:117031327]
Enhancers that have rs115901820[chr1:117031327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115901820[chr1:117031327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117031318 117031338 RREB1 JASPAR yes 31812719
chr1 117031320 117031340 RREB1 JASPAR yes 31812720
chr1 117031321 117031341 RREB1 JASPAR yes 31812721
chr1 117031322 117031327 SP1 TRANSFAC yes 31812722
chr1 117031323 117031333 ZNF740 JASPAR yes 31812723
chr1 117031323 117031343 RREB1 JASPAR yes 31812724
chr1 117031324 117031344 RREB1 JASPAR yes 31812725
chr1 117031325 117031335 SP1 JASPAR yes 31812726
chr1 117031325 117031346 ZNF263 JASPAR yes 31812727
chr1 117031326 117031346 RREB1 JASPAR yes 31812728
Genes associated with rs115901820[chr1:117031327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More