EnhancerDB
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  3. rs116066099[chr1:56046059]
Enhancers that have rs116066099[chr1:56046059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56036104 56052895 enh26722
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs116066099[chr1:56046059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56046052 56046061 SOX9 JASPAR yes 29051588
chr1 56046058 56046063 TFAP2A TRANSFAC yes 29051589
chr1 56046058 56046064 MZF1 JASPAR yes 29051590
chr1 56046059 56046069 GSC2 JASPAR yes 29051591
chr1 56046059 56046069 GSC JASPAR yes 29051592
Genes associated with rs116066099[chr1:56046059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More