EnhancerDB
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  3. rs116079229[chr1:42239117]
Enhancers that have rs116079229[chr1:42239117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116079229[chr1:42239117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42239115 42239129 TLX1 JASPAR yes 28420666
chr1 42239117 42239127 EVX1 JASPAR yes 28420667
chr1 42239117 42239127 EVX2 JASPAR yes 28420668
Genes associated with rs116079229[chr1:42239117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More