EnhancerDB
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  3. rs116079971[chr1:42362591]
Enhancers that have rs116079971[chr1:42362591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs116079971[chr1:42362591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42362590 42362594 NFE TRANSFAC yes 28435169
chr1 42362591 42362601 MAX JASPAR yes 28435170
chr1 42362591 42362602 USF1 JASPAR yes 28435171
chr1 42362591 42362602 USF2 JASPAR yes 28435172
Genes associated with rs116079971[chr1:42362591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More