EnhancerDB
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  3. rs116084333[chr1:25350456]
Enhancers that have rs116084333[chr1:25350456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr1 25350325 25350583 vista816
VISTA
Transcript factors that have rs116084333[chr1:25350456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25350190 25351159 P63 GTRD no Skin (Keratinocyte) 107802485
chr1 25350447 25350462 AR JASPAR yes 27554896
chr1 25350447 25350462 AR JASPAR yes 118252728
chr1 25350449 25350464 FOXA1 JASPAR yes 27554897
chr1 25350449 25350464 FOXA1 JASPAR yes 118252729
Genes associated with rs116084333[chr1:25350456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More