EnhancerDB
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  3. rs116089488[chr1:229167082]
Enhancers that have rs116089488[chr1:229167082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229146625 229173535 enh12758
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Placenta Breast Thyroid Pancreas Muscle (Myotube) Thymus Stomach
Transcript factors that have rs116089488[chr1:229167082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229167067 229167083 RFX3 JASPAR yes 35954853
chr1 229167067 229167083 RFX5 JASPAR yes 35954854
chr1 229167068 229167087 RFX2 JASPAR yes 35954855
chr1 229167070 229167085 RFX5 JASPAR yes 35954857
chr1 229167080 229167099 CTCF JASPAR yes 35954858
Genes associated with rs116089488[chr1:229167082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More