EnhancerDB
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  3. rs11609474[chr12:122952923]
Enhancers that have rs11609474[chr12:122952923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs11609474[chr12:122952923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122950737 122953032 ZBTB33 GTRD no Lung (A549) 108065921
chr12 122950940 122953038 TCF7L2 GTRD no Colon (HCT116) 21580072
chr12 122950940 122953038 TCF7L2 GTRD no Colon (HCT116) 108065922
chr12 122951166 122953120 ZBTB33 GTRD no Lung (A549) 108065924
chr12 122951209 122953004 ZNF274 GTRD no Blood (GM12878) 108065925
chr12 122951225 122952932 ZNF274 GTRD no Blood (GM12878) 108065926
chr12 122951253 122953084 ZNF274 GTRD no Blood (GM12878) 108065928
chr12 122951264 122953331 ZBTB33 GTRD no Lung (A549) 108065929
chr12 122951327 122953269 ZNF274 GTRD no Blood (GM12878) 108065930
chr12 122951354 122953170 ZBTB33 GTRD no Lung (A549) 108065931
chr12 122951585 122953145 ZBTB33 GTRD no Lung (A549) 108065935
chr12 122951599 122953081 ZNF274 GTRD no Blood (GM12878) 108065936
chr12 122951668 122953215 ZNF274 GTRD no Cervix (HeLa-S3) 21580089
chr12 122951668 122953215 ZNF274 GTRD no Cervix (HeLa-S3) 108065938
chr12 122951690 122953264 ZBTB33 GTRD no Lung (A549) 108065939
chr12 122951802 122953002 ZNF274 GTRD no Liver (HepG2) 21580090
chr12 122951802 122953002 ZNF274 GTRD no Liver (HepG2) 108065941
chr12 122951838 122953123 ZBTB33 GTRD no Lung (A549) 108065942
chr12 122951917 122952978 ZNF143 GTRD no Epithelial (MCF-7) 21580091
chr12 122951917 122952978 ZNF143 GTRD no Epithelial (MCF-7) 108065944
chr12 122951918 122953192 ZNF143 GTRD no Epithelial (MCF-7) 21580092
chr12 122951918 122953192 ZNF143 GTRD no Epithelial (MCF-7) 108065945
chr12 122951933 122953105 ZNF143 GTRD no Epithelial (MCF-7) 21580093
chr12 122951933 122953105 ZNF143 GTRD no Epithelial (MCF-7) 108065946
chr12 122951936 122953270 ZNF274 GTRD no Bone Marrow (K562) 108065947
chr12 122951939 122953418 ZNF143 GTRD no Epithelial (MCF-7) 21580094
chr12 122951939 122953418 ZNF143 GTRD no Epithelial (MCF-7) 108065948
chr12 122951940 122953130 ZNF274 GTRD no Blood (GM12878) 108065949
chr12 122951962 122953155 ZNF143 GTRD no Epithelial (MCF-7) 21580096
chr12 122951962 122953155 ZNF143 GTRD no Epithelial (MCF-7) 108065953
chr12 122952064 122953012 ZBTB33 GTRD no Lung (A549) 108065960
chr12 122952082 122953061 ZNF274 GTRD no Bone Marrow (K562) 108065962
chr12 122952092 122953091 ZNF143 GTRD no Epithelial (MCF-7) 21580099
chr12 122952092 122953091 ZNF143 GTRD no Epithelial (MCF-7) 108065964
chr12 122952102 122952997 CTCF GTRD no Spleen 108065965
chr12 122952112 122952957 ZNF143 GTRD no Epithelial (MCF-7) 21580101
chr12 122952112 122952957 ZNF143 GTRD no Epithelial (MCF-7) 108065968
chr12 122952112 122952976 ZNF274 GTRD no Liver (HepG2) 21580102
chr12 122952112 122952976 ZNF274 GTRD no Liver (HepG2) 108065969
chr12 122952125 122952956 ZNF274 GTRD no Bone Marrow (K562) 108065973
chr12 122952235 122953056 ZBTB33 GTRD no Lung (A549) 108066001
chr12 122952242 122953103 ZNF143 GTRD no Epithelial (MCF-7) 21580118
chr12 122952242 122953103 ZNF143 GTRD no Epithelial (MCF-7) 108066002
chr12 122952255 122953059 ZNF274 GTRD no Bone Marrow (K562) 108066005
chr12 122952273 122953024 ZNF274 GTRD no Blood (GM12878) 108066008
chr12 122952709 122952982 ZNF274 GTRD no Bone Marrow (K562) 108066016
chr12 122952911 122952926 HNF1A JASPAR yes 124283368
chr12 122952912 122952923 PHOX2A JASPAR yes 124283379
chr12 122952912 122952923 PROP1 JASPAR yes 124283380
chr12 122952912 122952926 POU4F1 JASPAR yes 124283381
chr12 122952912 122952928 POU4F2 JASPAR yes 124283382
chr12 122952912 122952928 POU4F3 JASPAR yes 124283383
chr12 122952913 122952923 PAX3 JASPAR yes 124283384
chr12 122952913 122952923 PAX7 JASPAR yes 124283385
chr12 122952913 122952924 PHOX2A JASPAR yes 124283386
chr12 122952913 122952924 PROP1 JASPAR yes 124283387
chr12 122952915 122952925 GSX1 JASPAR yes 124283388
chr12 122952915 122952925 GSX2 JASPAR yes 124283389
chr12 122952915 122952925 LHX2 JASPAR yes 124283390
chr12 122952915 122952925 LHX6 JASPAR yes 124283391
chr12 122952915 122952925 MNX1 JASPAR yes 124283392
chr12 122952915 122952925 NOTO JASPAR yes 124283393
chr12 122952915 122952925 POU6F1 JASPAR yes 124283394
chr12 122952915 122952925 RAX JASPAR yes 124283395
chr12 122952916 122952924 ISX JASPAR yes 124283396
chr12 122952916 122952924 LMX1A JASPAR yes 124283397
chr12 122952916 122952924 LMX1B JASPAR yes 124283398
chr12 122952916 122952924 NKX6-1 JASPAR yes 124283399
chr12 122952916 122952924 NKX6-2 JASPAR yes 124283400
chr12 122952916 122952924 PRRX1 JASPAR yes 124283401
chr12 122952916 122952924 RAX2 JASPAR yes 124283402
chr12 122952916 122952924 SHOX JASPAR yes 124283403
chr12 122952916 122952924 UNCX JASPAR yes 124283404
chr12 122952916 122952924 VAX1 JASPAR yes 124283405
chr12 122952916 122952929 DUXA JASPAR yes 124283406
chr12 122952916 122952930 POU4F1 JASPAR yes 124283407
chr12 122952917 122952927 PAX3 JASPAR yes 124283408
chr12 122952917 122952927 PAX7 JASPAR yes 124283409
chr12 122952917 122952928 DUX4 JASPAR yes 124283410
chr12 122952917 122952928 PHOX2A JASPAR yes 124283411
chr12 122952917 122952928 PROP1 JASPAR yes 124283412
chr12 122952920 122952934 ONECUT3 JASPAR yes 124283413
chr12 122952921 122952932 PROP1 JASPAR yes 124283414
Genes associated with rs11609474[chr12:122952923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 123899936 123921264 - RILPL2 ENSG00000150977.9 123921264 947013 Esophagus 0.180292 12665