EnhancerDB
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  3. rs116096443[chr11:1546301]
Enhancers that have rs116096443[chr11:1546301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 1527456 1547275 enh28557
Bone Marrow (K562) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Breast Thyroid Pancreas Thymus Stomach
Transcript factors that have rs116096443[chr11:1546301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 1545841 1549933 TCF7L2 GTRD no Colon (HCT116) 21465563
chr11 1545851 1550130 TCF7L2 GTRD no Colon (HCT116) 21465564
chr11 1545895 1549411 TCF7L2 GTRD no Colon (HCT116) 21465565
chr11 1545904 1550185 TCF7L2 GTRD no Colon (HCT116) 21465566
chr11 1545942 1549877 TCF7L2 GTRD no Colon (HCT116) 21465567
chr11 1546091 1548620 ZNF274 GTRD no Bone Marrow (K562) 21465568
chr11 1546155 1547088 ZNF274 GTRD no Bone Marrow (K562) 21465569
chr11 1546207 1547264 ZNF274 GTRD no Bone Marrow (K562) 21465570
chr11 1546254 1549197 TCF7L2 GTRD no Colon (HCT116) 21465571
chr11 1546261 1547089 ZNF274 GTRD no Bone Marrow (K562) 21465572
chr11 1546265 1547349 ZNF274 GTRD no Bone Marrow (K562) 21465573
chr11 1546268 1547784 ZNF274 GTRD no Bone Marrow (K562) 21465574
chr11 1546281 1550000 TCF7L2 GTRD no Colon (HCT116) 21465575
chr11 1546300 1546311 E2F4 JASPAR yes 36954628
chr11 1546300 1546311 E2F6 JASPAR yes 36954629
chr11 1546301 1546312 E2F1 JASPAR yes 36954630
Genes associated with rs116096443[chr11:1546301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More