EnhancerDB
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  3. rs116101490[chr1:200314925]
Enhancers that have rs116101490[chr1:200314925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116101490[chr1:200314925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200313703 200315096 ZNF274 GTRD no Liver (HepG2) 21363149
chr1 200313866 200315056 ZNF274 GTRD no Liver (HepG2) 21363150
chr1 200313906 200314989 ZNF274 GTRD no Liver (HepG2) 21363151
chr1 200313976 200314968 ZNF274 GTRD no Liver (HepG2) 21363153
chr1 200313979 200315408 ZNF274 GTRD no Liver (HepG2) 21363154
chr1 200314049 200314939 ZNF274 GTRD no Liver (HepG2) 21363156
chr1 200314070 200315027 ZNF274 GTRD no Liver (HepG2) 21363161
chr1 200314162 200314983 ZNF274 GTRD no Liver (HepG2) 21363171
chr1 200314232 200314930 ZNF274 GTRD no Liver (HepG2) 21363176
chr1 200314310 200314931 ZNF274 GTRD no Liver (HepG2) 21363178
chr1 200314914 200314925 FOXB1 JASPAR yes 34437711
chr1 200314917 200314929 SRF JASPAR yes 34437712
chr1 200314922 200314926 TEAD2 TRANSFAC yes 34437713
chr1 200314922 200314927 TBP TRANSFAC yes 34437714
chr1 200314922 200314928 TFIID TRANSFAC yes 34437715
Genes associated with rs116101490[chr1:200314925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More