EnhancerDB
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  3. rs11612597[chr12:54616729]
Enhancers that have rs11612597[chr12:54616729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs11612597[chr12:54616729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54616434 54617521 ZNF274 GTRD no Bone Marrow (K562) 21550453
chr12 54616461 54616801 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550454
chr12 54616470 54617358 ZNF274 GTRD no Bone Marrow (K562) 21550455
chr12 54616508 54616772 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550456
chr12 54616622 54617517 ZNF274 GTRD no Blood (GM12878) 21550457
chr12 54616716 54616729 ELF1 JASPAR yes 121030100
Genes associated with rs11612597[chr12:54616729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More