EnhancerDB
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  3. rs116129432[chr1:172615921]
Enhancers that have rs116129432[chr1:172615921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs116129432[chr1:172615921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172615911 172615924 HSF1 JASPAR yes 33143389
chr1 172615919 172615929 GSC2 JASPAR yes 33143390
chr1 172615920 172615928 OTX2 JASPAR yes 33143391
chr1 172615920 172615929 PITX3 JASPAR yes 33143392
Genes associated with rs116129432[chr1:172615921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More